BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B08LP1|AL425985
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1583 0.0
>3x_Contig1675
Length = 13954
Score = 1583 bits (798), Expect = 0.0
Identities = 813/816 (99%), Gaps = 2/816 (0%)
Strand = Plus / Minus
Query: 1 gatcatacaccaaaagactattcaatgattcggaccttttaactgccaagatcaaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12077 gatcatacaccaaaagactattcaatgattcggaccttttaactgccaagatcaaagaag 12018
Query: 61 aagcagaagaacttaccgaagctgttgataaaaaagatatagcttgggaatgtgctgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12017 aagcagaagaacttaccgaagctgttgataaaaaagatatagcttgggaatgtgctgatt 11958
Query: 121 tattttactttgctatggctaggctagttgccaatggcgtatcattagaggatgttgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11957 tattttactttgctatggctaggctagttgccaatggcgtatcattagaggatgttgagc 11898
Query: 181 gtaacctaaataccaaacacttgaaaatcacaagaagaaaaggtgacgccaaacctaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11897 gtaacctaaataccaaacacttgaaaatcacaagaagaaaaggtgacgccaaacctaagt 11838
Query: 241 ttctcaagaaggaaccagttgctgtccatgaagaagatggaaaaattgttcttaacgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11837 ttctcaagaaggaaccagttgctgtccatgaagaagatggaaaaattgttcttaacgttg 11778
Query: 301 tttccgctagtgacaaagctgccgtcgaaaaggcagtcacaagaccaattcagaaaacag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11777 -ttccgctagtgacaaagctgccgtcgaaaaggcagtcacaagaccaattcagaaaacag 11719
Query: 361 ctgaaattatgaacctggttaacccaatcattgaaaacgttattaagaacggtgacaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11718 ctgaaattatgaacctggttaacccaatcattgaaaacgttattaagaacggtgacaaag 11659
Query: 421 cgctagttgaattgacagctaagttcgatggtgtccaattagaaacaccagttttggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11658 cgctagttgaattgacagctaagttcgatggtgtccaattagaaacaccagttttggagg 11599
Query: 481 caccttatccagaagaataccttgatggattgactgatgaactaagagatgctttggacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11598 caccttatccagaagaataccttgatggattgactgatgaactaagagatgctttggacc 11539
Query: 541 tgtctattgaaaatgtaaaamagttccacgctgctcaaatgcaaagtg-aaccctagatg 599
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 11538 tgtctattgaaaatgtaaaaaagttccacgctgctcaaatgcaaagtgaaaccctagatg 11479
Query: 600 tcgaaactcaaccaggtgttgtctgctctaggttccctagacctatcgaaaaggttggtc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11478 tcgaaactcaaccaggtgttgtctgctctaggttccctagacctatcgaaaaggttggtc 11419
Query: 660 tatacattccgggtggtacagcaatcttaccaagtactgcgcttatgttaggtgtaccgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11418 tatacattccgggtggtacagcaatcttaccaagtactgcgcttatgttaggtgtaccgg 11359
Query: 720 cccaggttgctggatgtaaagaaattgttttcgcatcacctccaagaaagtctgacggta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11358 cccaggttgctggatgtaaagaaattgttttcgcatcacctccaagaaagtctgacggta 11299
Query: 780 gagtttctcctgaagttgtttatgttgcaagtaaag 815
||||||||||||||||||||||||||||||||||||
Sbjct: 11298 gagtttctcctgaagttgtttatgttgcaagtaaag 11263
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6410
Number of Sequences: 1807
Number of extensions: 6410
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)